Sains Malaysiana 53(10)(2024): 3263-3277
http://doi.org/10.17576/jsm-2024-5310-03
Sistematik Famili Athyriaceae di Semenanjung Malaysia Berdasarkan Gabungan Data Anatomi dan Molekul
(Systematics of Athyriaceae Family in Peninsular Malaysia Based on
Combination Anatomical and Molecular Data)
NUR ALIAH*, HAJA MAIDEEN, NURUL NADHIRAH
& NIK NORHAZRINA
Jabatan Sains Biologi dan Bioteknologi, Fakulti Sains dan Teknologi, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Selangor,
Malaysia
Diserahkan:
5 Mei 2024/Diterima: 10 Julai 2024
Abstrak
Famili paku pakis Athyriaceae mempunyai taburan kosmopolitan dengan anggaran 650 takson. Pengelasan terkini berdasarkan data daripada jujukan molekul telah mengelaskan spesies Athyriaceae kepada tiga genus utama iaitu Athyrium, Deparia serta Diplazium. Walau bagaimanapun, pengelasan ini masih tidak stabil dan sering berubah kerana belum terdapat data jujukan molekul yang lengkap serta menyeluruh bagi keseluruhan spesies dalam famili ini. Penyelidikan ini telah dijalankan untuk mengkaji hubungan filogeni antara spesies dalam famili Athyriaceae di Semenanjung Malaysia berdasarkan gabungan data ciri anatomi dan molekul. Bagi pendekatan anatomi, ciri bentuk stil dan jenis peruratan telah dicerap manakala bagi pendekatan molekul pula menggunakan data jujukan dari kawasan genom kloroplas (rbcL, atpB, atpA dan trnL-F) dan nukleus ITS (nITS). Keseluruhannya, topologi yang terhasil membuktikan bahawa famili Athyriaceae ialah monofiletik dengan sokongannilai bustrap yang tinggi iaitu 100% serta membentuk dua klad utamaiaitu
klad I yang terdiri daripada kesemua spesies Diplazium manakala klad II terdiri daripada kumpulan Athyrium-Cornopteris yang membentuk kumpulan bersama dengan Deparia.
Kata kunci: Anatomi; Athyriaceae; Diplazium; paku pakis; sistematik
Abstract
The ferns family Athyriaceae has a cosmopolitan distribution with ca.
650 taxa. Current classification based on molecular data characterized members
of Athyriaceae into three main genera which are Athyrium, Deparia, and Diplazium.
However, the classification of this family is still unstable due to incomplete
molecular data of the species in the family. This study was conducted to study
the phylogeny relationships of Athyriaceae species in
Peninsular Malaysia based on combination of anatomical and molecular data. In anatomical approach, characters
such as stele shape and type of venations have been observed meanwhile for molecular
study, sequences data were based on chloroplast regions (rbcL, atpB, atpA, trnL-F) and nuclear ITS (nITS).
Overall, the topology produced based on DNA sequences proved Athyriaceae is a
monophyletic family and supported well with high bootstrap value 100%. In
general, the trees produced formed two main clades in which clade I: consists
of all Diplazium species meanwhile
clade II comprises of Athyrium-Cornopteris and formed sister group with Deparia.
Keywords:
Anatomy; Athyriaceae; Diplazium;
ferns; systematics
RUJUKAN
Adjie, B., Takamiya, M., Ohta, M., Ohsawa, T.A. & Watano, Y. 2008. Molecular phylogeny of the Lady Fern
Genus Athyrium in Japan based on chloroplast rbcL and trnL-F sequences. Acta Phytotaxonomica et Geobotanica 59(2): 79-95.
Altschul, S.F., Thomas, L.M., Alejandro, A.S.,
Jinghui, Z., Webb, M. & David, J.L. 1997. Gapped BLAST and PST-BLAST: A new generation of protein database, search programs. Nucleic Acid Research 25: 3389-3402.
Arshad, S., Juhari, M.A.A.,
Talip, N., Wahab, N.A.A. & Adam, J. 2021. Anatomi dan mikromorfologi Tetrastigma rafflesiae (Vitaceae). Sains Malaysiana 50(4): 897-905.
Ching, R.C. 1938. A
revision of the Chinese and Sikkim-Himalayan Dryopteris with reference to some species from neighbouring
regions. Bulletin of the Fan Memorial
Institute of Biology, Botany 8: 157-334.
Doyle, J.J. & Doyle, J.L. 1990. Isolation of plants DNA from fresh tissue. Focus 12: 13-15.
Felsenstein, J. 1985. Evolutionary trees from DNA
sequences: A maximum-likelihood approach. Journal
of Molecular and Evolution 17: 368-376.
Hasebe, M., Omori, T., Nakazawa, M., Sano, T., Kato,
M. & Iwatsuki, K. 1994. rbcL gene sequences provide evidence for the evolutionary lineages of leptosporangiate ferns. Proceedings of the National Academy of
Sciences of the United States of America 91: 5730-5734.
Holttum, R.E. 1947. A revised classification of leptosporangiate ferns. Botanical
Journal of the Linnaean Society 53: 123-155.
Holttum, R.E. 1968. Revised Flora of Malaya. Vol. 2. Ferns.
Edisi ke-2. Singapura: Government Printing Office.
Johansen, D.A. 1940. Plant Microtechnique. New York:
McGraw-Hill Book Company Inc.
Kato, M. 1977.
Classification of Athyrium and allied
genera of Japan. Botanical Magazine,
Tokyo 90: 23-40.
Kuo, L-Y., Ebihara, A., Hsu, T-C., Rouhan, G., Huang, Y-M. Wang, C-N., Chiou, W-L. & Kato, M. 2016. Infrageneric revision of the fern genus Deparia (Athyriaceae, Aspleniineae, Polypodiales). Systematic Botany 43(3): 645-655.
Lanfear, R., Frandsen, P.B., Wright, A.M., Senfeld, T. & Calcott, B. 2017. PartitionFinder 2: New methods for selecting partitioned models of evolution for molecular and
morphological phylogenetic analyses. Molecular Biology and Evolution 34:
772-773.
Maideen, H., Aliah, N. & Nadhirah, N. 2021. A
new record of the fern genus Cornopteris (Athyriaceae) from Peninsular Malaysia. American Fern
Journal 111(2): 63-67.
Maideen, H., Nadhirah, N., Aliah, N. & Norhazrina, N. 2023. Anatomy and morphology of Taenitis Willd. ex Sprengel (Monilophytes) in Peninsular Malaysia. Sains Malaysiana 52(5): 1333-1343.
Maideen, H., Aliah, N., Norhazrina, N. & Go,
R. 2019. Rediscovery of Diplazium procumbens (Athyriaceae) in Peninsular Malaysia
after more than 70 years, with notes on the morphology, spore ornamentation and
anatomy. Phytotaxa 422(3): 241-247.
Maideen, H., Syazwani, B., Norhazrina,
N., Aliah, N., Noraini, T. & NurFarhanim, I.
2018. Anatomi rizom dan stip genus Pleocnemia Presl (Tectariaceae) di Semenanjung Malaysia. Sains Malaysiana 47(4): 645-649.
Mynnsen, C.M. & Sylvestre, L. 2019. Synopsis of Diplazium (Athyriaceae) from Brazil. American Fern Journal 109(4): 283-342.
Parris, B.S. & Latiff, A. 1997. Towards a
pteridophyte flora of Malaysia: A provisional checklist of taxa. Malayan
Nature Journal 50: 235-280.
Praptosuwiryo, T.N.
& Darnaedi, D. 2014. The stelar anatomy of stipe and its taxonomic
significance in Diplazium (Athyriaceae). Floribunda 4(8): 195-200.
PPG I. 2016. A community-derived classification for extant lycophytes and ferns. Journal of Systematics and Evolution 54(6): 563-603.
Radford, A.E. 1986. Fundamentals of Plant Systematics. New York: Harper & Rows Publishers. Inc.
Rothfels, C.J., Sundue, M.A., Kuo, L-Y., Larsson,
A., Kato, M., Schuettpelz, E. & Pryer,
K.M. 2012. A revised family-level classification for eupolypod II ferns (Polypodiidae: Polypodiales). Taxon 61(3): 515-533.
Sass, J.E. 1958. Botanical Microtechnique. Ed. ke-3.
Iowa: Iowa State University Press.
Schuettpelz, E. & Pryer, K.M. 2007. Fern phylogeny inferred from 400 leptosporangiate species and three plastid genes. Taxon 56(4): 1037-1050.
Smith, A.R., Pryer, K.M., Schuettpelz, E., Korall, P., Schneider, H. & Wolf, P.G. 2006. A classification of extant ferns. Taxon 55(3): 705-731.
Stuessy, T.F. 2009. Plant Taxonomy. The Systematic Evolution of Comparative Data. Edisi ke-2. New York: Columbia University Press.
Swofford, D.L. 2002. PAUP: Phylogenetics Analysis
Using Parsimony and (Other methods), version 4 Beta 10. Sunderland:
Sinauer Associates.
Taberlet, P., Gielly, L., Pautou, G. & Bouvet, J. 1991. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology 17: 1105-1109.
Thompson, J.D., Gibson, T.J., Plewniak,
F., Jeanmougin, F. & Hinggins,
D.G. 1994. The CLUSTAL W Windows: Flexible strategies for multiple sequencing alignment aided by quality analysis tools. Nucleic Acid Research 25: 4875-4882.
Umikalsom, Y. 1992.
Anatomical studies of the Malaysian Aspleniaceae and Athyriaceae. Botanical Journal of the Linnaean Society 110:
111-119.
Wei, R., Schneider, H. & Zhang, X-C. 2013. Toward
a new circumscription of the twinsorus-fern genus Diplazium (Athyriaceae): A molecular phylogeny
with morphological implications and infrageneric taxonomy. Taxon 62(3): 441-457.
Wei, G., Song, J., Cao, Y., Sun, Q., Yao, H, Wu, Q.,
Chao, J., Zhou, J., Xue, W. & Duan,
J. 2013. Application of the ITS2 region
for barcoding medicinal plants of Selaginellaceae in Pteridophyta. PLoS ONE 8(6):
e67818.
*Pengarang untuk surat-menyurat; email:
aliahkhaduwi@ukm.edu.my
|